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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51569.1Transcriptional regulator (ArsR family protein); COG0640 Predicted transcriptional regulators. (99 aa)    
Predicted Functional Partners:
EAR51566.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.591
EAR51568.1
YeeE/YedE family protein; COG2391 Predicted transporter component.
       0.579
EAR51567.1
Hypothetical protein; COG2391 Predicted transporter component.
       0.576
EAR51564.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
 0.480
EAR51565.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
       0.469
EAR51348.1
COG2217 Cation transport ATPase.
  
  
 0.425
EAR51563.1
COG3453 Uncharacterized protein conserved in bacteria.
       0.409
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.402
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.