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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51583.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.682
EAR49801.1
COG0050 GTPases - translation elongation factors.
    
   0.682
EAR50070.1
Hypothetical protein.
  
     0.634
EAR50069.1
Hypothetical protein.
  
     0.560
EAR51584.1
Hypothetical protein.
       0.551
EAR52346.1
Hypothetical protein.
  
     0.516
EAR52757.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.497
EAR52755.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.480
EAR52758.1
Hypothetical protein.
  
  
  0.438
EAR50112.1
Putative dual use protein Tyr:Ser/Thr phosphatase; COG2453 Predicted protein-tyrosine phosphatase.
  
  
  0.438
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.