STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51590.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
EAR50372.1
Hypothetical protein.
  
     0.565
EAR51594.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.540
EAR52484.1
Lipoprotein, putative.
  
     0.533
EAR50154.1
Hypothetical protein.
  
     0.532
EAR52238.1
Hypothetical protein.
  
     0.517
EAR50412.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
     0.507
EAR51592.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
       0.506
EAR51593.1
Membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.506
EAR51591.1
Hypothetical protein.
       0.456
EAR50902.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.