Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR51597.1COG3904 Predicted periplasmic protein. (272 aa)    
Predicted Functional Partners:
EAR51598.1
Hypothetical protein.
 
     0.957
EAR52636.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
    0.576
EAR50041.1
Putative metal-dependent hydrolase; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
  
     0.496
EAR51599.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
       0.456
EAR51471.1
COG3735 Uncharacterized protein conserved in bacteria.
  
     0.439
EAR52762.1
Hypothetical protein; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
     0.420
EAR50810.1
Hypothetical protein.
  
  
 0.415
EAR50531.1
Hypothetical protein; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases.
  
     0.408
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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