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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51611.1COG4765 Uncharacterized protein conserved in bacteria. (117 aa)    
Predicted Functional Partners:
EAR51609.1
COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit.
 
     0.919
EAR51610.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.855
EAR49983.1
Hypothetical protein.
  
     0.642
EAR51608.1
Predicted glycosyltransferase.
       0.592
EAR50575.1
COG1495 Disulfide bond formation protein DsbB.
 
     0.544
EAR53038.1
Transporter, Tim44 family protein; COG4395 Uncharacterized protein conserved in bacteria.
  
     0.539
EAR50940.1
COG3807 Uncharacterized protein conserved in bacteria.
  
     0.523
EAR49786.1
COG2960 Uncharacterized protein conserved in bacteria.
  
     0.522
atpF-2
FoF1 ATP synthase, subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.517
EAR49984.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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