tatC protein (Oceanicola granulosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

tatC

Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (292 aa)

Predicted Functional Partners:

tatA

0.999

EAR51624.1

0.999

EAR51626.1

0.855

EAR51536.1

0.777

EAR51541.1

0.777

EAR52713.1

0.553

EAR52866.1

0.553

secD

0.536

EAR50463.1

0.532

EAR51622.1

0.523

Your Current Organism:

Oceanicola granulosus

NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAR50463.1	EAR52866.1	OG2516_08998	OG2516_10401	COG0681 Signal peptidase I; Belongs to the peptidase S26 family.	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	0.617
EAR50463.1	secD	OG2516_08998	OG2516_02209	COG0681 Signal peptidase I; Belongs to the peptidase S26 family.	Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.	0.611
EAR50463.1	tatC	OG2516_08998	OG2516_01861	COG0681 Signal peptidase I; Belongs to the peptidase S26 family.	Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.532
EAR51536.1	EAR51624.1	OG2516_01416	OG2516_01856	COG2132 Putative multicopper oxidases.	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	0.765
EAR51536.1	tatA	OG2516_01416	OG2516_01851	COG2132 Putative multicopper oxidases.	Twin-arginine translocation protein, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.596
EAR51536.1	tatC	OG2516_01416	OG2516_01861	COG2132 Putative multicopper oxidases.	Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.777
EAR51541.1	EAR51624.1	OG2516_01441	OG2516_01856	Bilirubin oxidase; COG2132 Putative multicopper oxidases.	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	0.765
EAR51541.1	tatA	OG2516_01441	OG2516_01851	Bilirubin oxidase; COG2132 Putative multicopper oxidases.	Twin-arginine translocation protein, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.596
EAR51541.1	tatC	OG2516_01441	OG2516_01861	Bilirubin oxidase; COG2132 Putative multicopper oxidases.	Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.777
EAR51622.1	EAR51624.1	OG2516_01846	OG2516_01856	Hypothetical protein; COG2378 Predicted transcriptional regulator.	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	0.523
EAR51622.1	EAR51626.1	OG2516_01846	OG2516_01866	Hypothetical protein; COG2378 Predicted transcriptional regulator.	Hypothetical protein; COG2607 Predicted ATPase (AAA+ superfamily).	0.523
EAR51622.1	tatA	OG2516_01846	OG2516_01851	Hypothetical protein; COG2378 Predicted transcriptional regulator.	Twin-arginine translocation protein, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.589
EAR51622.1	tatC	OG2516_01846	OG2516_01861	Hypothetical protein; COG2378 Predicted transcriptional regulator.	Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.523
EAR51624.1	EAR51536.1	OG2516_01856	OG2516_01416	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	COG2132 Putative multicopper oxidases.	0.765
EAR51624.1	EAR51541.1	OG2516_01856	OG2516_01441	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Bilirubin oxidase; COG2132 Putative multicopper oxidases.	0.765
EAR51624.1	EAR51622.1	OG2516_01856	OG2516_01846	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Hypothetical protein; COG2378 Predicted transcriptional regulator.	0.523
EAR51624.1	EAR51626.1	OG2516_01856	OG2516_01866	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Hypothetical protein; COG2607 Predicted ATPase (AAA+ superfamily).	0.855
EAR51624.1	EAR52713.1	OG2516_01856	OG2516_00764	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.655
EAR51624.1	secD	OG2516_01856	OG2516_02209	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.	0.462
EAR51624.1	tatA	OG2516_01856	OG2516_01851	Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components.	Twin-arginine translocation protein, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.999

page 1 of 3

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About