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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52238.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
EAR49872.1
Hypothetical protein.
 
 
   0.737
EAR52994.1
core-2/I-branching enzyme family protein.
  
     0.711
EAR50584.1
Type I secretion target repeat protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP).
  
 
  0.703
EAR52192.1
Hypothetical protein.
  
     0.697
EAR50154.1
Hypothetical protein.
  
     0.674
EAR50633.1
Hypothetical protein.
  
     0.651
EAR49781.1
Hypothetical protein.
  
     0.647
EAR52638.1
Hypothetical protein.
  
     0.631
EAR49468.1
Hypothetical protein.
  
     0.620
EAR51074.1
Hypothetical protein; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.
   
   0.619
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.