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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52272.1COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (514 aa)    
Predicted Functional Partners:
EAR50661.1
Corrinoid methyltransferase protein, putative; COG5012 Predicted cobalamin binding protein.
  
  0.851
EAR52280.1
Hypothetical protein.
 
     0.798
EAR49560.1
COG3894 Uncharacterized metal-binding protein.
 
     0.798
EAR50662.1
Hypothetical protein.
 
     0.798
EAR52277.1
Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain.
 
     0.795
EAR52279.1
metF protein-like; COG0685 5,10-methylenetetrahydrofolate reductase.
 
    0.758
EAR50659.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
     0.739
EAR50865.1
Hypothetical protein.
  
     0.632
EAR52459.1
Hypothetical protein.
 
     0.629
EAR49438.1
Transcriptional regulator, XRE family protein; COG1396 Predicted transcriptional regulators.
  
     0.606
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.