STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52294.1Sarcosine oxidase, beta subunit family protein; COG0665 Glycine/D-amino acid oxidases (deaminating). (414 aa)    
Predicted Functional Partners:
EAR52291.1
Putative sarcosine oxidase, alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.992
EAR50673.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.989
EAR51970.1
Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.989
EAR52290.1
COG4583 Sarcosine oxidase gamma subunit.
 
  0.956
EAR52292.1
COG4311 Sarcosine oxidase delta subunit.
 
  0.956
EAR50674.1
COG4311 Sarcosine oxidase delta subunit.
 
  0.948
EAR51969.1
Hypothetical protein; COG4311 Sarcosine oxidase delta subunit.
 
  0.933
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.862
EAR51971.1
Hypothetical protein; COG4583 Sarcosine oxidase gamma subunit.
 
  0.798
EAR50672.1
COG4583 Sarcosine oxidase gamma subunit.
   
  0.737
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.