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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49395.127 kDa outer membrane protein, putative; COG1651 Protein-disulfide isomerase. (249 aa)    
Predicted Functional Partners:
EAR50575.1
COG1495 Disulfide bond formation protein DsbB.
  
 
 0.808
EAR50497.1
Thiol:disulfide interchange protein, DsbA family protein; COG1651 Protein-disulfide isomerase.
  
     0.739
EAR49393.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
       0.632
EAR49394.1
Aminotransferase, classes I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.590
bamD
Competence lipoprotein ComL, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.532
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.499
EAR50558.1
DSBA-like thioredoxin family protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.
  
 
 0.452
EAR52221.1
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.443
EAR49911.1
COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis.
 
   
 0.427
EAR50181.1
PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
 
 0.424
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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