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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49404.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (160 aa)    
Predicted Functional Partners:
EAR49403.1
COG3027 Uncharacterized protein conserved in bacteria.
 
  
 0.926
EAR52921.1
Lipolytic enzyme, G-D-S-L; COG2755 Lysophospholipase L1 and related esterases.
   
 0.874
EAR49576.1
Lipolytic enzyme, G-D-S-L family protein; COG2755 Lysophospholipase L1 and related esterases.
   
 0.874
EAR49446.1
PaxA, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 
 0.809
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.789
EAR52548.1
Hypothetical protein.
  
 0.774
EAR51755.1
COG4786 Flagellar basal body rod protein.
    
   0.657
EAR50736.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.657
EAR52273.1
Hypothetical protein.
  
     0.636
EAR53019.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
     0.635
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.