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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49522.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EAR49523.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.702
EAR49521.1
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
       0.575
EAR50397.1
Usg, putative.
  
     0.529
EAR50720.1
Putative flagellar biosynthesis/type III secretory pathway protein.
  
     0.461
EAR52321.1
Lipoprotein, putative; COG0457 FOG: TPR repeat.
  
     0.457
EAR49524.1
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
       0.454
EAR52796.1
Hypothetical protein.
  
     0.453
EAR50681.1
COG4961 Flp pilus assembly protein TadG.
  
     0.426
EAR50371.1
Hypothetical protein.
  
     0.401
EAR51238.1
Lipoprotein, putative.
  
     0.400
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.