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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51012.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
EAR53019.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
    0.928
EAR51009.1
Predicted ferripyochelin binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
       0.684
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.684
EAR51011.1
yicC family protein; COG1561 Uncharacterized stress-induced protein.
       0.684
EAR51524.1
Competence protein.
  
    0.574
EAR50209.1
Possible flagellar switch protein FliM.
  
    0.511
EAR49998.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
   
    0.503
EAR51629.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.499
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
   
    0.482
recO
DNA repair protein RecO; COG0730 Predicted permeases.
  
     0.475
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.