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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49693.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
EAR49694.1
Hypothetical protein.
 
     0.966
EAR49695.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
    0.966
EAR49692.1
Ribonuclease BN; COG1295 Predicted membrane protein.
 
    0.804
EAR49696.1
Hypothetical protein.
       0.732
EAR52053.1
COG1981 Predicted membrane protein.
  
     0.676
EAR50531.1
Hypothetical protein; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases.
 
     0.665
EAR52367.1
COG3474 Cytochrome c2.
    
 
 0.644
EAR50832.1
COG3474 Cytochrome c2.
    
 
 0.644
EAR52054.1
Hypothetical protein.
  
     0.617
EAR52052.1
COG4244 Predicted membrane protein.
  
     0.609
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.