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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51647.1Putative tryptophan halogenase. (495 aa)    
Predicted Functional Partners:
EAR51648.1
Calcium binding hemolysin protein, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.714
EAR52973.1
Tryptophan halogenase.
 
  
 
0.583
EAR51943.1
COG3971 2-keto-4-pentenoate hydratase.
 
  
 0.537
EAR50357.1
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
     
 0.524
EAR51419.1
Hypothetical protein.
   
 
 0.513
EAR52068.1
SapC protein, putative.
 
     0.477
EAR51649.1
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
  0.460
EAR51698.1
COG2124 Cytochrome P450.
   
  0.458
EAR51025.1
COG2124 Cytochrome P450.
   
  0.458
EAR50645.1
COG2124 Cytochrome P450.
   
  0.458
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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