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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51660.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EAR51662.1
Hypothetical protein; COG1896 Predicted hydrolases of HD superfamily.
       0.855
EAR51659.1
Hypothetical protein; COG2945 Predicted hydrolase of the alpha/beta superfamily.
       0.841
EAR51661.1
Hypothetical protein.
       0.773
EAR51658.1
Iron-sulfur cluster assembly transcription factor IscR, putative; COG1959 Predicted transcriptional regulator.
       0.678
EAR51340.1
Tellurite resistance protein; COG0004 Ammonia permease.
  
     0.577
EAR52478.1
Hypothetical protein.
  
     0.552
EAR51657.1
Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
       0.533
EAR52310.1
COG3847 Flp pilus assembly protein, pilin Flp.
  
     0.501
EAR50454.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
  
     0.491
EAR51656.1
FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.487
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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