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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51018.1Hypothetical protein; COG3176 Putative hemolysin. (265 aa)    
Predicted Functional Partners:
EAR51017.1
Acyltransferase, putative; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.987
EAR51019.1
Hypothetical protein.
 
     0.722
EAR51020.1
Hypothetical protein.
       0.605
EAR50613.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
  
     0.459
EAR51405.1
CvpA family protein; COG1286 Uncharacterized membrane protein, required for colicin V production.
  
     0.448
EAR49911.1
COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis.
  
     0.408
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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