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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50542.1Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily. (448 aa)    
Predicted Functional Partners:
EAR50541.1
COG3803 Uncharacterized protein conserved in bacteria.
      0.893
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.610
EAR50544.1
Hypothetical protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
       0.549
EAR50548.1
Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily.
 
   
 0.434
EAR50545.1
AhpC/TSA family protein; COG1225 Peroxiredoxin.
       0.414
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
      
 0.408
EAR50540.1
Diguanylate cyclase, putative; COG2203 FOG: GAF domain.
       0.405
EAR53120.1
HemY domain protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.400
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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