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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50546.1Peptidase, M23/M37 family protein; COG0739 Membrane proteins related to metalloendopeptidases. (434 aa)    
Predicted Functional Partners:
EAR50547.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
 
   
 0.938
EAR49777.1
LysM domain/M23/M37 peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.779
EAR50548.1
Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily.
  
    0.774
EAR50395.1
Penicillin-binding protein 1A; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
   
 0.706
EAR49673.1
Glycosyl transferase, family 51; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
     0.704
EAR50545.1
AhpC/TSA family protein; COG1225 Peroxiredoxin.
  
  
 0.662
EAR52600.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
   
 0.661
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.659
EAR51736.1
COG1868 Flagellar motor switch protein.
    
   0.657
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
     0.629
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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