close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50558.1DSBA-like thioredoxin family protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis. (221 aa)    
Predicted Functional Partners:
EAR51921.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
   
   0.920
EAR51416.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
   
   0.920
EAR50557.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
       0.697
EAR50559.1
Multidrug (bicyclomycin) efflux pump, Major facilitator superfamily protein (MFS); COG0477 Permeases of the major facilitator superfamily.
   
   0.659
EAR51727.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.591
EAR51760.1
Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.591
EAR50739.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
   0.591
EAR50748.1
Possible FlgD protein; COG1843 Flagellar hook capping protein.
    
   0.591
EAR51975.1
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
 
    0.582
EAR51922.1
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
  
    0.529
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.