close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50584.1Type I secretion target repeat protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP). (384 aa)    
Predicted Functional Partners:
EAR52243.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
  0.922
EAR49446.1
PaxA, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 0.859
EAR49715.1
FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
   0.772
EAR52994.1
core-2/I-branching enzyme family protein.
  
     0.748
EAR52202.1
30S ribosomal protein S2; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
  0.722
EAR49872.1
Hypothetical protein.
  
 
  0.712
EAR52238.1
Hypothetical protein.
  
 
  0.703
EAR52995.1
Hypothetical protein.
  
     0.689
EAR50624.1
Carboxyl-terminal protease family protein; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
   
   0.662
EAR50158.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.