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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49475.1Membrane protein, MarC family protein; COG2095 Multiple antibiotic transporter. (205 aa)    
Predicted Functional Partners:
EAR50836.1
Mechanosensitive ion channel family protein; COG3264 Small-conductance mechanosensitive channel.
 
    0.783
EAR49473.1
ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.781
EAR49474.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.773
EAR51343.1
COG3264 Small-conductance mechanosensitive channel.
  
    0.754
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.588
EAR49472.1
Hypothetical protein.
       0.548
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
      
 0.420
EAR49615.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
       0.400
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.