STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49778.1Thiamine-phosphate pyrophosphorylase, putative; COG0352 Thiamine monophosphate synthase. (208 aa)    
Predicted Functional Partners:
EAR50933.1
Molybdopterin biosynthesis protein MoeB, putative; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
 0.899
EAR51006.1
COG0226 ABC-type phosphate transport system, periplasmic component.
   
    0.725
EAR53009.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
   
    0.725
lysS
COG1384 Lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.669
EAR52623.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
 
    0.652
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 
 
 0.616
argH
COG0165 Argininosuccinate lyase.
  
   0.583
EAR49777.1
LysM domain/M23/M37 peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
       0.572
EAR50643.1
COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis.
  
     0.565
EAR49595.1
Hypothetical protein.
  
     0.564
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.