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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49603.1COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family. (243 aa)    
Predicted Functional Partners:
EAR49602.1
Efflux ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.780
EAR52187.1
Iron-sulfur cluster assembly family protein; Belongs to the HesB/IscA family.
 
 
 0.730
EAR51691.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.728
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
      0.656
EAR52793.1
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.606
EAR49511.1
COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
   
 0.554
EAR49604.1
Hypothetical protein.
 
     0.531
EAR51235.1
NADH-ubiquinone oxidoreductase family protein.
  
     0.470
EAR52873.1
NADH-ubiquinone oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.459
EAR50175.1
DNA polymerase III subunit chi.
       0.446
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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