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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50185.1Hypothetical protein; COG2188 Transcriptional regulators. (226 aa)    
Predicted Functional Partners:
EAR50186.1
Nitrilotriacetate monooxygenase component B; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
     0.638
EAR50184.1
Hypothetical protein; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
       0.518
EAR51902.1
Transcriptional regulator, AraC/XylS family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
   
    0.499
EAR51927.1
COG2188 Transcriptional regulators.
  
     0.480
EAR51242.1
COG1396 Predicted transcriptional regulators.
  
    0.475
EAR51883.1
COG1396 Predicted transcriptional regulators.
  
    0.475
EAR52717.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
    0.428
EAR52884.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
  
     0.419
EAR51371.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
    0.410
EAR52894.1
ABC transporter, membrane spanning protein; COG1175 ABC-type sugar transport systems, permease components.
  
     0.408
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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