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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50193.1Hypothetical protein; COG0501 Zn-dependent protease with chaperone function. (117 aa)    
Predicted Functional Partners:
EAR50194.1
Hypothetical protein; COG0586 Uncharacterized membrane-associated protein.
       0.773
EAR50192.1
Xylose operon repressor; COG1940 Transcriptional regulator/sugar kinase.
       0.623
EAR50195.1
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; COG4607 ABC-type enterochelin transport system, periplasmic component.
       0.495
EAR50196.1
ABC ferric siderophore transporter, inner membrane subunit; COG4606 ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.495
EAR50197.1
ABC ferric siderophore transporter, inner membrane subunit; COG4605 ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.495
EAR50198.1
ABC ferric siderophore transporter, ATPase subunit; COG4604 ABC-type enterochelin transport system, ATPase component.
       0.495
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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