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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50211.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
EAR50210.1
COG0591 Na+/proline symporter.
 
    0.976
EAR50212.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.811
EAR50209.1
Possible flagellar switch protein FliM.
       0.701
EAR50213.1
COG3713 Outer membrane protein V.
 
     0.551
EAR52180.1
Hypothetical protein.
  
     0.532
EAR49427.1
Hypothetical protein.
  
     0.531
EAR51394.1
COG3242 Uncharacterized protein conserved in bacteria.
  
     0.520
EAR51650.1
Hypothetical protein.
  
     0.483
EAR51588.1
Phasin, PhaP.
  
     0.473
EAR50312.1
Lipoprotein, putative; COG3087 Cell division protein.
  
     0.461
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.