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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50216.1Hypothetical protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component. (253 aa)    
Predicted Functional Partners:
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 
 0.929
EAR51016.1
PAS sensor Signal Tranduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
  
 
 0.898
EAR49926.1
Trypsin domain protein; COG5640 Secreted trypsin-like serine protease.
  
    0.858
EAR50215.1
COG4103 Uncharacterized protein conserved in bacteria.
       0.855
EAR50849.1
COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 
 0.817
EAR51355.1
COG3239 Fatty acid desaturase.
 
     0.816
EAR49853.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.805
rlmJ
Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.792
EAR51353.1
DNA binding protein, putative; COG1396 Predicted transcriptional regulators.
 
     0.777
EAR50672.1
COG4583 Sarcosine oxidase gamma subunit.
  
     0.742
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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