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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49437.1TPR repeat family protein. (87 aa)    
Predicted Functional Partners:
EAR52417.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
 0.951
EAR52675.1
Hypothetical protein; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 0.945
EAR52991.1
COG0029 Aspartate oxidase.
  
 0.945
EAR49438.1
Transcriptional regulator, XRE family protein; COG1396 Predicted transcriptional regulators.
       0.855
EAR49436.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
 
     0.794
EAR52633.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
 0.737
EAR49439.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
  0.647
EAR52414.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.614
EAR52419.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
    
 0.551
EAR50888.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.513
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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