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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52483.1Hypothetical protein; COG1564 Thiamine pyrophosphokinase. (235 aa)    
Predicted Functional Partners:
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.845
EAR52484.1
Lipoprotein, putative.
       0.712
EAR51752.1
COG1256 Flagellar hook-associated protein.
    
   0.657
EAR53141.1
COG1256 Flagellar hook-associated protein.
    
   0.657
EAR52019.1
COG4642 Uncharacterized protein conserved in bacteria.
  
     0.534
EAR52482.1
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
  
    0.487
murG
N-acetylglucosaminyl transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
       0.484
EAR49980.1
S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.
   
    0.472
EAR52747.1
Hypothetical protein; COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
    
 0.459
EAR51276.1
Probable transcriptional regulator; COG3629 DNA-binding transcriptional activator of the SARP family.
    
 0.459
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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