close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52491.1Probable ATP-binding/permease fusion ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (747 aa)    
Predicted Functional Partners:
EAR52490.1
COG0845 Membrane-fusion protein.
 0.999
EAR49706.1
Type I secretion membrane fusion protein, HlyD family protein; COG0845 Membrane-fusion protein.
 0.988
EAR52492.1
Hypothetical protein.
 
 
 0.984
EAR49528.1
COG2375 Siderophore-interacting protein.
   
  0.976
EAR49602.1
Efflux ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
EAR50201.1
ABC-transport protein, ATP-binding component; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
EAR50202.1
ABC-transport protein, ATP-binding component; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
EAR53068.1
ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
EAR53069.1
ABC multidrug efflux pump, fused ATPase and inner membrane subunits; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
EAR51510.1
ABC efflux transporter, fused ATPase and inner membrane subunits; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.933
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.