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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52499.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EAR49694.1
Hypothetical protein.
  
    0.873
EAR52500.1
Hypothetical protein.
       0.773
EAR50414.1
Osmotically inducible protein OsmC; COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
    0.739
EAR49658.1
DNA-binding ferritin-like protein; DNA protection during starvation conditions; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
    0.640
EAR52498.1
Response regulator receiver protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
       0.562
EAR49567.1
Trp repressor binding protein WrbA, putative; COG0655 Multimeric flavodoxin WrbA.
   
    0.463
EAR50941.1
COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
    0.431
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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