Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR49694.1 | EAR52503.1 | OG2516_03528 | OG2516_05328 | Hypothetical protein. | Ribonuclease BN; COG1295 Predicted membrane protein. | 0.539 |
EAR50942.1 | EAR52503.1 | OG2516_13756 | OG2516_05328 | COG3871 Uncharacterized stress protein (general stress protein 26). | Ribonuclease BN; COG1295 Predicted membrane protein. | 0.437 |
EAR52503.1 | EAR49694.1 | OG2516_05328 | OG2516_03528 | Ribonuclease BN; COG1295 Predicted membrane protein. | Hypothetical protein. | 0.539 |
EAR52503.1 | EAR50942.1 | OG2516_05328 | OG2516_13756 | Ribonuclease BN; COG1295 Predicted membrane protein. | COG3871 Uncharacterized stress protein (general stress protein 26). | 0.437 |
EAR52503.1 | EAR52504.1 | OG2516_05328 | OG2516_05333 | Ribonuclease BN; COG1295 Predicted membrane protein. | Hypothetical protein; COG3668 Plasmid stabilization system protein. | 0.556 |
EAR52503.1 | EAR52986.1 | OG2516_05328 | OG2516_11001 | Ribonuclease BN; COG1295 Predicted membrane protein. | COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.415 |
EAR52503.1 | polA | OG2516_05328 | OG2516_16856 | Ribonuclease BN; COG1295 Predicted membrane protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.416 |
EAR52504.1 | EAR52503.1 | OG2516_05333 | OG2516_05328 | Hypothetical protein; COG3668 Plasmid stabilization system protein. | Ribonuclease BN; COG1295 Predicted membrane protein. | 0.556 |
EAR52986.1 | EAR52503.1 | OG2516_11001 | OG2516_05328 | COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | Ribonuclease BN; COG1295 Predicted membrane protein. | 0.415 |
polA | EAR52503.1 | OG2516_16856 | OG2516_05328 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Ribonuclease BN; COG1295 Predicted membrane protein. | 0.416 |