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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52526.1COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (325 aa)    
Predicted Functional Partners:
EAR52527.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
    
0.983
EAR52528.1
ATP-binding protein of ribose ABC transporter; COG1129 ABC-type sugar transport system, ATPase component.
  0.978
EAR51805.1
Ribose ABC transporter, periplasmic binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.962
EAR52529.1
Ribose binding protein of ABC transporter; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.956
EAR50172.1
Putative ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
  0.906
rbsA
ABC sugar transporter, ATPase subunit protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.903
rbsA-2
Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.902
EAR51946.1
COG1129 ABC-type sugar transport system, ATPase component.
  0.898
EAR51807.1
ABC-transport system ATP binding protein; COG1129 ABC-type sugar transport system, ATPase component.
  0.897
EAR50173.1
ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; COG1879 ABC-type sugar transport system, periplasmic component.
  
  0.886
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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