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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52530.1Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases. (304 aa)    
Predicted Functional Partners:
EAR52531.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.964
EAR51105.1
COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
 0.821
EAR52529.1
Ribose binding protein of ABC transporter; COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.784
EAR51107.1
COG3718 Uncharacterized enzyme involved in inositol metabolism.
  
  
 0.754
EAR52880.1
Putative exported oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.703
EAR52142.1
Probable transmembrane protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
 
 0.692
EAR52532.1
Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.684
EAR53134.1
Probable trehalosemaltose utilization protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.674
EAR50596.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.663
EAR51104.1
IolC myo-catabolism protein; COG0524 Sugar kinases, ribokinase family.
  
 
 0.657
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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