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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52535.1Hypothetical protein; COG3386 Gluconolactonase. (304 aa)    
Predicted Functional Partners:
EAR50761.1
Putative gluconokinase; COG3265 Gluconate kinase.
    
 0.816
EAR51115.1
COG4993 Glucose dehydrogenase.
  
  
 0.729
EAR49607.1
COG4993 Glucose dehydrogenase.
     
 0.694
EAR49608.1
Hypothetical protein.
     
 0.694
EAR52538.1
Putative Alpha-amylase; COG0296 1,4-alpha-glucan branching enzyme.
  
    0.610
glgB
1,4-alpha-glucan branching enzyme (Glycogen branching enzyme); Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
    0.610
EAR52541.1
Putative trehalose synthase; COG0366 Glycosidases.
  
  
 0.603
glgE
Putative Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
    0.601
EAR52534.1
Hypothetical protein; COG3440 Predicted restriction endonuclease.
       0.596
EAR52536.1
Putative glycosyl hydrolase; COG3280 Maltooligosyl trehalose synthase.
       0.596
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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