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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52559.1Mandelate racemase / muconate lactonizing enzyme family protein; Has no detectable activity with D-mannonate and with a panel of 70 other acid sugars (in vitro), in spite of the conservation of the residues that are expected to be important for catalytic activity and cofactor binding. May have evolved a divergent function. (408 aa)    
Predicted Functional Partners:
EAR49891.1
Putative 2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
 
 0.891
EAR52560.1
Myo-inositol 2-dehydrogenase; COG0673 Predicted dehydrogenases and related proteins.
 
     0.890
EAR52558.1
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.762
EAR50509.1
D-mannonate oxidoreductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
  
 0.490
EAR52665.1
2-dehydropantoate 2-reductase; COG1893 Ketopantoate reductase.
   
    0.467
EAR50507.1
Hydrolase, UxaA family protein; COG2721 Altronate dehydratase.
 
  
 0.454
EAR50224.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
  
 0.453
EAR51858.1
Paral putative galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.447
EAR50243.1
Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
  
 
0.446
EAR50506.1
2-dehydro-3-deoxygluconokinase; COG0524 Sugar kinases, ribokinase family.
 
  
  0.433
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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