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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52568.1ABC sugar transporter, periplasmic ligand binding protein; COG1879 ABC-type sugar transport system, periplasmic component. (316 aa)    
Predicted Functional Partners:
EAR52569.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.995
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.994
EAR50849.1
COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.993
EAR50171.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  0.980
EAR49853.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.979
EAR50605.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  0.974
EAR51806.1
Ribose ABC transporter, permease protein; COG4158 Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.973
rbsA
ABC sugar transporter, ATPase subunit protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.961
EAR51945.1
Putative sugar uptake ABC transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  0.961
EAR51825.1
Sugar ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 0.961
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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