STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52571.1Amidohydrolase family superfamily protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. (264 aa)    
Predicted Functional Partners:
EAR52062.1
Mandelate racemase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.950
EAR51347.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
  0.905
EAR52569.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
     0.803
EAR52969.1
Putative aldo/keto reductase; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
    
  0.802
EAR52732.1
N-acetylneuraminate lyase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
  
    0.782
EAR51798.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
  
    0.782
rbsA
ABC sugar transporter, ATPase subunit protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
       0.773
EAR52568.1
ABC sugar transporter, periplasmic ligand binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.771
EAR52112.1
Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 
0.769
EAR52064.1
Oxidoreductase UcpA; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
  0.643
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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