Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR52582.1Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins. (324 aa)    
Predicted Functional Partners:
EAR52580.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.556
EAR52581.1
Hypothetical protein.
       0.556
EAR51853.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.542
rpoH
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
       0.539
gatB
aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
      0.448
EAR53134.1
Probable trehalosemaltose utilization protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.436
EAR51106.1
MocC-like protein (rhizopine catabolism), myo-inositol catabolism iolE-like protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.414
EAR51107.1
COG3718 Uncharacterized enzyme involved in inositol metabolism.
 
    0.410
EAR51100.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.409
EAR51104.1
IolC myo-catabolism protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.407
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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