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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52582.1Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins. (324 aa)    
Predicted Functional Partners:
EAR51105.1
COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
 
    0.738
EAR51107.1
COG3718 Uncharacterized enzyme involved in inositol metabolism.
 
    0.732
EAR51106.1
MocC-like protein (rhizopine catabolism), myo-inositol catabolism iolE-like protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.611
EAR51100.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.608
EAR52580.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.556
EAR52581.1
Hypothetical protein.
       0.556
EAR51853.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.542
rpoH
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
       0.539
EAR51104.1
IolC myo-catabolism protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.473
cobB-2
COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
    
  0.457
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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