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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52585.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
EAR52584.1
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.729
EAR49604.1
Hypothetical protein.
  
     0.597
EAR51575.1
Hypothetical protein.
  
     0.560
EAR52273.1
Hypothetical protein.
  
     0.497
EAR52266.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.489
EAR51473.1
Hypothetical protein.
  
     0.462
EAR50891.1
Hypothetical protein.
  
     0.440
EAR50367.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.422
EAR52013.1
Membrane protein, putative; COG2891 Cell shape-determining protein.
  
     0.421
EAR52594.1
Hypothetical protein.
 
     0.416
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.