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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49826.1Cobalt chelatase, pCobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase). (625 aa)    
Predicted Functional Partners:
EAR52628.1
Cobalt chelatase, CobS subunit; COG0714 MoxR-like ATPases.
 
 
 0.999
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
  0.918
EAR52955.1
COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
     
 0.900
EAR52623.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
 
     0.763
EAR51495.1
Hypothetical protein.
  
     0.731
EAR49600.1
COG3820 Uncharacterized protein conserved in bacteria.
  
     0.629
atpF-2
FoF1 ATP synthase, subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.593
EAR50028.1
Hypothetical protein; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase.
  
     0.585
EAR50493.1
COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.570
EAR53103.1
Hypothetical protein; COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination.
  
     0.566
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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