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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50646.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
EAR50645.1
COG2124 Cytochrome P450.
 
  0.969
EAR52995.1
Hypothetical protein.
  
 
   0.787
EAR52588.1
COG3562 Capsule polysaccharide export protein.
 
     0.785
EAR49920.1
epsK domain protein.
  
 
   0.783
EAR52638.1
Hypothetical protein.
  
     0.771
EAR52993.1
Hypothetical protein.
  
     0.770
EAR49919.1
Hypothetical protein.
  
     0.769
EAR52994.1
core-2/I-branching enzyme family protein.
  
     0.768
EAR50158.1
Hypothetical protein.
  
     0.767
EAR53002.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
     0.761
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.