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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50647.1SapC protein, putative. (262 aa)    
Predicted Functional Partners:
EAR52071.1
Type I secretion target repeat protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
     0.732
EAR52069.1
Peptidase, M50 family protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
     0.730
EAR51226.1
GAF domain protein; COG3605 Signal transduction protein containing GAF and PtsI domains.
 
     0.726
EAR51227.1
Peptidase, M50 family protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
     0.726
EAR52070.1
GAF domain protein; COG0845 Membrane-fusion protein.
 
     0.726
ureC
Urease, alpha subunit; COG0804 Urea amidohydrolase (urease) alpha subunit.
    
   0.613
EAR52072.1
Parallel beta-helix repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
     0.602
EAR50645.1
COG2124 Cytochrome P450.
       0.526
EAR50646.1
Hypothetical protein.
       0.526
EAR51223.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.508
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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