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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50664.1Hypothetical protein; COG1199 Rad3-related DNA helicases. (160 aa)    
Predicted Functional Partners:
EAR50663.1
COG2166 SufE protein probably involved in Fe-S center assembly.
       0.708
EAR52840.1
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
     0.552
EAR49968.1
Hypothetical protein.
  
     0.507
EAR51477.1
Hypothetical protein; COG1087 UDP-glucose 4-epimerase.
  
     0.482
EAR49616.1
Predicted permease.
  
     0.476
EAR49977.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.465
EAR50373.1
Hypothetical protein.
  
     0.459
EAR52758.1
Hypothetical protein.
  
     0.433
EAR52436.1
Inner membrane protein.
  
     0.420
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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