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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50691.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
EAR50404.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.774
EAR50403.1
TRAP transporter, DctM subunit, putative; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
     0.772
EAR49904.1
Hypothetical protein.
  
     0.658
EAR50534.1
Hypothetical protein.
  
     0.610
EAR53009.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
  
     0.598
EAR52478.1
Hypothetical protein.
  
     0.568
EAR52755.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.559
EAR50690.1
Hypothetical protein.
       0.556
EAR52757.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.544
EAR52758.1
Hypothetical protein.
  
     0.530
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.