close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50095.1Regulatory protein, TetR; COG1309 Transcriptional regulator. (198 aa)    
Predicted Functional Partners:
EAR50097.1
Hypothetical protein; COG2030 Acyl dehydratase.
 
     0.939
EAR50096.1
Putative acid-CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.928
EAR50098.1
Phosphate acetyltransferase; COG2030 Acyl dehydratase.
 
     0.905
EAR51215.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.690
EAR50094.1
Na+/H+ antiporter, CPA1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
     0.683
EAR51220.1
BioH protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.683
EAR50093.1
Response regulator; COG0784 FOG: CheY-like receiver.
       0.636
EAR50099.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.622
EAR50100.1
COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase.
       0.622
EAR51218.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
     0.581
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.