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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50104.1COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit. (653 aa)    
Predicted Functional Partners:
EAR50103.1
COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.999
EAR52377.1
Hydantoin utilization protein; COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.995
EAR51964.1
COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.995
EAR51876.1
5-oxoprolinase (ATP-hydrolyzing); COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.995
EAR50102.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.810
EAR50080.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.746
EAR51963.1
N-carbamoylsarcosine amidase-like; COG1335 Amidases related to nicotinamidase.
    
  0.608
EAR51874.1
COG4126 Hydantoin racemase.
 
     0.401
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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