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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50106.1Probable mdcF malonate transporter; COG0679 Predicted permeases. (309 aa)    
Predicted Functional Partners:
EAR53058.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
  
 0.807
EAR52034.1
Malate dehydrogenase; COG0281 Malic enzyme.
  
  
 0.807
EAR50105.1
Amidase family protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family.
 
     0.791
EAR50107.1
Cobalamin synthesis protein/P47K family protein; COG0523 Putative GTPases (G3E family).
       0.773
EAR50108.1
Hypothetical protein.
       0.773
EAR51702.1
COG0726 Predicted xylanase/chitin deacetylase.
       0.477
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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