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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51791.1Putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (253 aa)    
Predicted Functional Partners:
EAR50935.1
COG0765 ABC-type amino acid transport system, permease component.
  0.993
EAR51792.1
COG0765 ABC-type amino acid transport system, permease component.
  0.992
EAR50025.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 0.967
EAR50217.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
 
 0.942
EAR50023.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.942
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.937
EAR50849.1
COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.928
EAR51016.1
PAS sensor Signal Tranduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
   
 0.918
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
    
 0.901
EAR49432.1
His/Glu/Gln/Arg/opine family ABC transporter, permease protein; COG4160 ABC-type arginine/histidine transport system, permease component.
 
  0.887
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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